A Brisbane airport spokesman told AAP the two RAAF aircraft arrived Friday night, but he was unable to provide passenger headcounts.
Hundreds of holidaymakers, workers and other returnees have touched down after military airlifts since Wednesday.
The planes that carried them back were delivering humanitarian supplies to Vanuatu for hundreds of households.
The cargo included personal hygiene kits, illness, tools and hardware and tarpaulins for covering damaged structures.
The magnitude 7.3 quake, which struck the capital Port Vila on Tuesday killing at least 10 people and injuring at least 200, has caused massive damage to the city and surrounding areas.
As rescue and recovery efforts continue, a potential health crisis looms as aid workers believe around 20,000 people on the island are without access to clean water.
UNICEF water, sanitation and hygiene specialist based in Vanuatu, Brecht Mommen, warns that illness will likely spread.
"It's a rush against time to get water trucks organised for those areas so that we prevent a second disaster, which is a diarrhoea outbreak," he said.
The extent of damage to Port Vila's water infrastructure remains unclear, with repair timelines still uncertain.
Aid agencies have also noted challenges around official casualty numbers, as they believe not all have been transported to hospitals and some injured residents remain trapped or are avoiding the severely damaged Vila Central Hospital, the main medical facility.
Around 1000 people are estimated to have been displaced, according to the United Nations.
Relief efforts face significant challenges due to blocked roads, traffic congestion and limited communication networks.
Forecasted rain threatens to worsen landslides triggered by the earthquake, including a major slip that has blocked Vanuatu's main seaport.
While humanitarian flights continue, local media reported that Port Vila airport is expected to reopen for commercial operations on Sunday, offering some hope for increased aid and recovery resources.